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CanVAS Hayward2016 · Founder
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Genome medallion
About this medallion

This medallion is built from this dog's genome. The outer ring is its breed composition, a corrected ancestry decomposition, colored to match its star in the atlas. The inner gauges are the traits we predict. If an owner claims the page, their real photo can take its place.

A Golden Retriever

This dog is a Golden Retriever from the Hayward2016 research cohort. One of 18,477 dogs in the atlas.

ID: PFZ7E05_PFZ7E05
See this dog in the atlas
About this dog

This dog sits well inside the Golden Retriever cluster - a fairly typical example.

Trait-class predictions (size, leg length, coat) not yet materialized for this record. The raw genotype calls at the 15 morphology loci are in the table below.

This dog's nearest neighbors

The five dogs in the atlas whose genetic profiles sit closest to this dog's. Click any of them to keep exploring.

  1. A research dog 30.39
  2. A research dog 31.83
  3. A research dog 32.40
  4. A research dog 33.35
  5. A research dog 33.41
This dog's breed

This dog sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation.

  1. Golden Retriever 83%
  2. Labrador Retriever 17%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Trait markers

The atlas reads body size, legs, coat, ears and skull shape through one marker each. We checked every marker against breeds that visibly have and lack its trait, and none yet tells them apart, so this page shows no trait calls for This dog.

Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.936
y 10.451
z 7.826
PCA-256 distance from breed centroid
30.81
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which this dog scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC240 z = 2.88
  • chr16:43,515,565 loading 0.0364
  • chr12:4,421,359 loading 0.0345
  • chr12:4,288,226 loading 0.0342
PC119 z = -2.77
  • chr24:2,576,794 loading 0.0370
  • chr6:3,625,190 loading 0.0350
  • chr6:3,210,008 loading -0.0323
PC214 z = 2.76
  • chr22:26,809,841 loading 0.0329
  • chr13:7,517,248 loading -0.0323
  • chr26:11,829,785 loading 0.0322
Ancestry reconstruction error: 0.56